Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPEIIRLSSTIKACDQY--FNQILVHTGQNYDYTLNQI-FFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLK-IPVFHMEAGNRC--FDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHRDKINHSDVLNKL--GLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYK-MPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFD------YNALQKDAFVVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK |
| 1V4V Chain:A ((7-318)) | ----RVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQER--QALPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTG-------QTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENW---PLLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVF---PVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAG-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103432 for 2417 contacts (-42.8/contact) +
2D Compatibility (PS) -31812 + (NN) -10434 + (LL) 5712
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -164116.0 ( -67.90 by residue)
QMean score : 0.387
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