Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITI-----TSVVLGNTLNNIRLINMNLY---KSNHYYWKFVSILLISILI-----------ESIALIIVFLYFFNLNTIDIIFLILLNILMCLRIYL-NVFFRMTLKYNQILYIA------------LIQFLGLLIGLFLYYLIQNWIVCFITSELFATIYTLVKLRG----LTIGEYQSEDNNVVKDYVMLLSTNS--------LNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNIKKQYLKTNLFA-----------IAALCLVMIICYPITLIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQA-NYMTLHTITFIFITILM-TIAFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD- |
| 3MK7 Chain:A ((5-470)) | TSTAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFG-REQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -410678 for 3301 contacts (-124.4/contact) +
2D Compatibility (PS) -39815 + (NN) -1414 + (LL) 204
1D Compatibility (HY) -23200 + (ID) 3100
Total energy: -478003.0 ( -144.81 by residue)
QMean score : 0.320
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