Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
2OEM Chain:A ((86-100)) | ----------------------------------------------------------------------------------------ADLPALLVTTFGKLSLD-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 76 for 56 contacts (1.4/contact) +
2D Compatibility (PS) -1566 + (NN) -1138 + (LL) 12588
1D Compatibility (HY) -800 + (ID) 300
Total energy: 8860.0 ( 158.21 by residue)
QMean score : 0.277
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