Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHMTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDIDLNDDEVISIFVFDKSIE
2OPA Chain:A ((14-44))
----EQKRNLVEKVTEAVKETTGASEEKIVVFIEE---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OPA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5251 for 134 contacts (39.2/contact) +
2D Compatibility (PS) -3608 + (NN) -3228 + (LL) 6928
1D Compatibility (HY) -400 + (ID) 300
Total energy: 4643.0 ( 34.65 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_2OPA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPA-query.scw
PDB file :
Tito_Scwrl_2OPA.pdb
: