Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEE---------------DDETKYHYFTKLLNLLKYEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
1WZA Chain:A ((43-105)) | ------------------TIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYG-TLEDFHKLVEAAHQRGIKVIIDLPIN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9139 for 214 contacts (-42.7/contact) +
2D Compatibility (PS) -5162 + (NN) -4879 + (LL) 21368
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -612.0 ( -2.86 by residue)
QMean score : 0.574
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