Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKNDLLVMS---------VVYILTSVIMFYINGLSKQFFTYVVGFPIIYFGYICLVNLIKKRSRNN------------------------------------------------------------------------------------ |
| 4R2F Chain:A ((38-431)) | GAIKFWDMPWATPAYNDAAKKIAEGFSGANSKATYQIIQWNNFYQTFSSAIASKTGPAVSTGGGFQAFQFEEQGQIAYADKVIEKLKSNGQFDDFLPGVVEPFKTSKGYVAVPWQLDIRPLWYRKSLFEKAGVGVPTDWASLLEAGKKLKGVGAVGFATGSGAGNNIGNHLMIMMMLNNGGGVFTKDGELDVLNDRNVEAVEFLLELVSNGVIDPAAVSYTTDNLNAQWKDSKAAYGMLTLGVPERVGDTSGDIVVASPIAGPHGDKAALIFPNNIMMYTNTPSQEASEEFVVYYLGK-----LKELWQQKLMNALPVFKSITEMPEFTADPNNVKIVNEYVPIAKTFASQGTALSANLAALDGGQALNQFTQTVLTGKTDAKSALTAFDTGLKSVLKK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12492 for 182 contacts (-68.6/contact) +
2D Compatibility (PS) -5908 + (NN) -1938 + (LL) 312
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -22276.0 ( -122.40 by residue)
QMean score : -0.008
|
|
|