Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMIKMSPEEIRAKSQSY----GQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ
4IYI Chain:A ((5-84))
----KITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQ----WAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFR-------------
General information:
TITO was launched using:
RESULT:
Template:
4IYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6549 for 337 contacts (-19.4/contact) +
2D Compatibility (PS) -8196 + (NN) -1115 + (LL) 1808
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -20252.0 ( -60.09 by residue)
QMean score : 0.755
(partial model without unconserved sides chains):
PDB file :
Tito_4IYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IYI-query.scw
PDB file :
Tito_Scwrl_4IYI.pdb
: