Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDANFLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK
2E6F Chain:A ((280-312))
---------------------------------------------------------GPGIFTRLEDELLEIMARKGYRTLEEFRGRVKT------------
General information:
TITO was launched using:
RESULT:
Template:
2E6F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3952 for 129 contacts (-30.6/contact) +
2D Compatibility (PS) -3482 + (NN) -849 + (LL) 5128
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -5455.0 ( -42.29 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_2E6F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E6F-query.scw
PDB file :
Tito_Scwrl_2E6F.pdb
: