Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLS-LDHIDVSD-DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYA--LCVNEQGSLIKLTTKELELDYRNSIIQKE---HLVVLEAAFTLAPGKMTEIQ----------AKMDDLTERRESKQPLEYP------SCGSVFQRP--------------------PGH-----FAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES |
3I99 Chain:A ((41-343)) | ----------------------------------------------DDLKALYCSAEWASLPKLIIGKGSNMLFTCHYTGMIVVNRLNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCL-ETGTVKRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNAGSFFKNPVISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAADIQQRVFNCYGIELEHEVRFIGE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136898 for 1949 contacts (-70.2/contact) +
2D Compatibility (PS) -26933 + (NN) -2337 + (LL) 2700
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -183318.0 ( -94.06 by residue)
QMean score : 0.654
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