Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL |
1OFC Chain:X ((106-126)) | --------------------------------------------------------------------------------------------------------------------------------LSQGFTAWTKRDFNQFIKANE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3333 for 73 contacts (-45.7/contact) +
2D Compatibility (PS) -2314 + (NN) -1158 + (LL) 10744
1D Compatibility (HY) -800 + (ID) 150
Total energy: 2989.0 ( 40.95 by residue)
QMean score : -0.419
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