Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
2FEP Chain:S ((2-86))
-AQKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKSIMGVMSLGIAKGAEITISASGADENDALNALEETMKSEGL--
General information:
TITO was launched using:
RESULT:
Template:
2FEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46646 for 646 contacts (-72.2/contact) +
2D Compatibility (PS) -9253 + (NN) -3278 + (LL) 324
1D Compatibility (HY) -8000 + (ID) 2650
Total energy: -69503.0 ( -107.59 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2FEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEP-query.scw
PDB file :
Tito_Scwrl_2FEP.pdb
: