Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV
3RKL Chain:A ((16-63))
-----GHKEFVLSNLQEDIKNLAE-IVYQLAKL-IEKLSQYEEEVDTELYNLLHE------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5792 for 217 contacts (-26.7/contact) +
2D Compatibility (PS) -4645 + (NN) 671 + (LL) 4360
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -10156.0 ( -46.80 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_3RKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RKL-query.scw
PDB file :
Tito_Scwrl_3RKL.pdb
: