Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ
1OTF Chain:A ((2-55))
-PIAQLYIIEGRTDEQKETLIRQVSEAMANSLDAPLERVRVLITEMPKNHFGIGG------
General information:
TITO was launched using:
RESULT:
Template:
1OTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22716 for 276 contacts (-82.3/contact) +
2D Compatibility (PS) -6191 + (NN) -4078 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -38605.0 ( -139.87 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_1OTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OTF-query.scw
PDB file :
Tito_Scwrl_1OTF.pdb
: