Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDDAERSSSDINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEPGYEHRYFDRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEELLELTKGDV-NDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQF---------EQLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQLNGGSIKIKSEINKGTTFKIIF |
| 4BIX Chain:A ((61-279)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGES-----KELERIETEAQRLDSMINDLLVMSRNQQKNALVSE--TIKAN-QLWSEVLD------NAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRY--SHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34688 for 1242 contacts (-27.9/contact) +
2D Compatibility (PS) -21965 + (NN) -7505 + (LL) 18796
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -58762.0 ( -47.31 by residue)
QMean score : 0.426
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