Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
1AFO Chain:A ((70-79)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPEITLIIFG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1882 for 32 contacts (-58.8/contact) +
2D Compatibility (PS) -1123 + (NN) -151 + (LL) 17036
1D Compatibility (HY) -800 + (ID) 200
Total energy: 12880.0 ( 402.50 by residue)
QMean score : 0.049
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