Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESR-EGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
2K1H Chain:A ((1-83))
MEIIAISETPNHNTMKVSLSEPRQD-NSFTTYTAAQEGQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIENTFA
General information:
TITO was launched using:
RESULT:
Template:
2K1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31305 for 495 contacts (-63.2/contact) +
2D Compatibility (PS) -8878 + (NN) -3087 + (LL) -172
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -55042.0 ( -111.20 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_2K1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1H-query.scw
PDB file :
Tito_Scwrl_2K1H.pdb
: