Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
1J3M Chain:A ((3-30))
--GMRKTLKATLAEARAQVEAALKEEGFGI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3848 for 112 contacts (34.4/contact) +
2D Compatibility (PS) -3187 + (NN) -3086 + (LL) 2504
1D Compatibility (HY) 400 + (ID) 150
Total energy: 329.0 ( 2.94 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1J3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J3M-query.scw
PDB file :
Tito_Scwrl_1J3M.pdb
: