Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTK-DPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGG-NGSFNYSKTISYTQKSYVSEVDKQ-NSKSVKWGVKANEFVT----PDGKKSAHDRY---LFVQSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIY-AERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| 2LKF Chain:A ((9-289)) | -------------------------------VKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINS--GFVKPNPNDYDFSK-LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGL--LNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFL-AGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDL-YQIRW--NGFYWAGANYKNFKTRTFKSTYEIDWENHKVKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36565 for 2126 contacts (-17.2/contact) +
2D Compatibility (PS) -29074 + (NN) -15972 + (LL) 2392
1D Compatibility (HY) -22400 + (ID) 4550
Total energy: -106169.0 ( -49.94 by residue)
QMean score : 0.426
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