Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE
3KOR Chain:A ((1-99))
MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETN-
General information:
TITO was launched using:
RESULT:
Template:
3KOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23893 for 520 contacts (45.9/contact) +
2D Compatibility (PS) -9618 + (NN) 2706 + (LL) 204
1D Compatibility (HY) 7200 + (ID) 400
Total energy: 23985.0 ( 46.12 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_3KOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KOR-query.scw
PDB file :
Tito_Scwrl_3KOR.pdb
: