Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGLKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALKSKY
3T48 Chain:A ((11-81))
-----------------------------------------QHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPL----
General information:
TITO was launched using:
RESULT:
Template:
3T48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1060 for 417 contacts (-2.5/contact) +
2D Compatibility (PS) -7577 + (NN) -2986 + (LL) 3268
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -10205.0 ( -24.47 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3T48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T48-query.scw
PDB file :
Tito_Scwrl_3T48.pdb
: