Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGELKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMTNHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL |
4X2T Chain:A ((358-383)) | -------------------------------------------------GDIITA-SNGKTIEVGNTDAEGRLTL------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2340 for 95 contacts (24.6/contact) +
2D Compatibility (PS) -2758 + (NN) -2210 + (LL) 11280
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 6402.0 ( 67.39 by residue)
QMean score : 0.315
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