Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFGGVVPEVASRHHVEGITTTINEALVDADVSMEDIDAIAVTEGPGLIGALLIGVNAAKALAFAYDKPLIPVHHIAGHIYANHI----EEPLTFPLIALIVSGGHTELVYMKDHLSFEVIGETRDDAVGEAYDKVARTIGLNYPGGPQVDR--------------LAAEGEDTYSFPRVWLDKDSYDFSFSGLKSAV---INQLHNQRQKNIPIIE-ANVATSFQNSVVEVLTFK-----AIQACKEYSVQRLIVAGGVASNKGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHSLYQQGRFADLALNGHSNIDLEEYSAE |
| 3WUH Chain:A ((7-355)) | --KGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLD-------KAHIHHQARIGPLTERALIESN-AREGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVP-QFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGFK---GTMIAREMEKFINQDINDQDFALKLEMP---------RNMLSFSFSAFITALRTNLTKLGKT-----PEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL----FNFYYPPMDLCSDNSIMIGWAGIEIWESLRL------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157506 for 2363 contacts (-66.7/contact) +
2D Compatibility (PS) -30988 + (NN) -11698 + (LL) 2728
1D Compatibility (HY) -23600 + (ID) 5300
Total energy: -226364.0 ( -95.80 by residue)
QMean score : 0.419
|
|
|