Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINVTLKQIQSWIPCEIEDQFLNQEINGVTIDSRAISKNMLFIPFKGENVDGHRFVSKALQDGAGAAFYQRGTPIDENVSGPIIWVEDTLTALQQLAQAYLRHVNPKVIAVTGSNGKTTTKDMIESVLHTEFKVKKTQGNYNNEIGLPLT-ILELDNDTEISILEMG---MSGFHEIEFLSNLAQPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKDNGTFIYDGDEPLLKPHVKEVENAKCISIGVATDNALVCSVDDRDTTGISFTINNKEHYDLPILGKHNMKNATIAIAVGHELGLTYNTIYQNLKNVSLTGMRMEQHTLENDITVINDAYNASPTSMRAAIDTLGTLTGRRILILGDVLELGENSKEMHIGVGNYLEEKHIDVLYTFGNEAKYIYDSGQQHVEKAQHFNSKDDMIEVLTSDLKAHDRVLVKGSRGMKLEEVVNALIS |
| 3LK7 Chain:A ((93-365)) | -------------------------------------------------------------------------------------LEKQIPVLTEVELAYLVS-ESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGN----IGFPASEVVQAANDKDTLVMELSSFQLMGVKEF-------RPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTK-ATIVPFST-TEKVDGAYVQDKQLFYKGENIMSVD--DIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKS---TNILATQKALSGFDNTKVILIAGGLDRGNEFDEL------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98568 for 2119 contacts (-46.5/contact) +
2D Compatibility (PS) -28793 + (NN) -5461 + (LL) 11948
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -138124.0 ( -65.18 by residue)
QMean score : 0.299
|
|
|