Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MN------YSSRQQPDKHWLRKVDWVLVATIAV-LAIFSVLLINSAMGGGQYSANFGIRQIFYYILGAIFAGIIMFISPKKIKH----YTYLLYFLICLLLIGLLV---IPESPITPIINGAKSWYTFGPISIQPSEFM-----KIILILALARVVSRHNQFTFNKSFQSDLLLFFKIIGVSLVPSIL---ILLQNDLGTTLVLAAIIAGVMLVSGITWRILAPIFITGIVGAMTVILGILYAPA-LIENLLGVQLYQ----MGRINSWLDPYTYSSGDGYHLTESLKAIGSGQLLGKGYNHGEVYIPENHTDFI-FSVIGEELGFIGSVILILIFLFLIFHLIRLAAKIEDQFNKIFIVGFVTLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALW--SMMTGIGIVLSIYYHEPKRYVDLYHPKSN |
| 3P0S Chain:A ((43-454)) | ANDGRQDIFSGAPQPNQHHTLVYGKSYHFTITNGLPEFRHLATTNS--------GYYAQQRFKHIHGIPWERLLMYVSEGELLRMFRDYTSLKVEEVVCEVYSLGVRLPFVTSATTSSVANANAQYPIGCFHFDEAYETNYGINNVADIINKALGTEWKNATRPTAAVTTAWSEQFPNISASSTSRDINNPVIVDYSL--PYFENNVPKDVGIYDYVDIKNGTTAYGKCWEKRFKPTNGLLYAESTLKGNVVTPLAAQPTNIMTPIPGLENGYFMSNDQIRERRDLTTSVPPVALTATKLNQSASNNLNAFVDYMGYNYFGEQKCAPQSMPKFMIGF------VNIRNEDNSLLNAKWDILIKTRIRLTGLQSTREWVA--RTDRIPPQYFTSQYTQFRYPNINETPLLRSLGTFKLPTKRPGMDSRIAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338058 for 2717 contacts (-124.4/contact) +
2D Compatibility (PS) -39452 + (NN) 9031 + (LL) 1116
1D Compatibility (HY) -1600 + (ID) 2950
Total energy: -371913.0 ( -136.88 by residue)
QMean score : 0.111
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