Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2ORV Chain:A ((19-190))
-------GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY------------MEALPACLLRDVAQEAL-GVAVIGIDEGQFFPD-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV------IGGADKYHSVCRLCYF-----------
General information:
TITO was launched using:
RESULT:
Template:
2ORV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80730 for 1300 contacts (-62.1/contact) +
2D Compatibility (PS) -17416 + (NN) -8743 + (LL) 1880
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -124809.0 ( -96.01 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2ORV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORV-query.scw
PDB file :
Tito_Scwrl_2ORV.pdb
: