Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERV--IDVVISGAFKSIGVYQDIDDEVRNEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLNILDSLSD-SYPTLAMIYVTH---FIEEITGNFTKILLLKDGESVQQGLIDDILT--SENMSRFFQKNVAVQRWNNRFSMAMLE
4U00 Chain:A ((19-241))----------------VLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDG-LSVKDDRALREIRREVGMV-------FQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALD---PEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVA---DRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV---------------


General information:
TITO was launched using:
RESULT:

Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120412 for 1703 contacts (-70.7/contact) +
2D Compatibility (PS) -23311 + (NN) -12065 + (LL) 3924
1D Compatibility (HY) -16400 + (ID) 3450
Total energy: -171714.0 ( -100.83 by residue)
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_4U00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U00-query.scw
PDB file : Tito_Scwrl_4U00.pdb: