Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVAS--LDLDFIAKLYND-----LYINKKTIDDVSAVSEVK---YDIKS----QMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEIEGV----SLFELQANQLKTLNH------QSGH--TIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSE-EGKLILNQQGRIMETPNGNGGVFKSL-------DKAG-------YLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPK--PGESVGRLVNVDCKDTVLEYSEL------DPEVANQFNNANIGIHAFKLGFILNAVNRE---LPYHLAIKNLKQLDENFGVIEQPTL--KFELFYFDIFTY----------GTSFVTLQVPREEEFSPLKNKEGKDSVATATEDLRRMGLI |
| 4BQH Chain:A ((14-454)) | -----RLTGANQDHILTALEHGSEAERASLTAQITNELAGVDF--RHFNDVLRESLEISK-----SLAEPPAKDSFFDISSVDRRRGQAKRIKNLEAVGYKAIQKGQIAFLILAGGSGTRLGFDKPKGFFTCDGLQQRKSLFMMHCEKIRRRQEIAESISGSGRKARVQLLVMTSGQNDAETQRFFEENSYFGLEREQVHFFAQSSVPCYDENTGRIIMENRGRICAAPGGNGAVFAALAAPRATK----TLQVKESLLQHLRKLGIAYVQIGNIDNLLANVADPVFIGYAIEEEAHVVVKTC-PKRGPDERVGVFVRASGKWGVVEYTEIRAKEIDDATGELKFNCANISSNLCSLHFMSLAAERMKSFTQYHAARKKIP-------TIKGPVMGIKLEAFLFDLFRFVDECDHPPKDSGAFRIMQVDRDDEFGPVKNADGAAS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129684 for 2739 contacts (-47.3/contact) +
2D Compatibility (PS) -39016 + (NN) -17875 + (LL) 2496
1D Compatibility (HY) -27200 + (ID) 7000
Total energy: -218279.0 ( -79.69 by residue)
QMean score : 0.433
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