Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
1P3J Chain:A ((1-212))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLL---
General information:
TITO was launched using:
RESULT:
Template:
1P3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66353 for 1693 contacts (-39.2/contact) +
2D Compatibility (PS) -23014 + (NN) -13207 + (LL) 144
1D Compatibility (HY) -26000 + (ID) 7300
Total energy: -135730.0 ( -80.17 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1P3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3J-query.scw
PDB file :
Tito_Scwrl_1P3J.pdb
: