Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLVTVEEK
3DLL Chain:W ((1-55))
---MKIKLVRSVIGRPGNQVKTVQALGLRKIGDSREVSDTPAVRGMVKTVKHLLEVQE-
General information:
TITO was launched using:
RESULT:
Template:
3DLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30362 for 346 contacts (-87.8/contact) +
2D Compatibility (PS) -5454 + (NN) 3314 + (LL) 480
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -38772.0 ( -112.06 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_3DLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLL-query.scw
PDB file :
Tito_Scwrl_3DLL.pdb
: