Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSN-VDLINYLPKNKIDSADVSQKLGYNIGG--NFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQ-NSKGVKWGVKANSFVT----PNGQVS---AYDQYLF-AQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKH---DAFKNRNV---TVKYEVNWKTHEVKIKSITPK |
| 4Q7G Chain:A ((31-312)) | ----------------------------SEKKVDD---KITLYKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLKAAGNINSGYKKPNPKDYNY-SQFYWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNGSKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNELFLGGRQSSSNAGQNFLPTHQMPLLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMD-------RYTNQWNRLHWVGNNYKNQNTVTFTSTYEVDWQNHTVKL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q7G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19502 for 2085 contacts (-9.4/contact) +
2D Compatibility (PS) -28168 + (NN) -9700 + (LL) 3932
1D Compatibility (HY) -18000 + (ID) 5000
Total energy: -76438.0 ( -36.66 by residue)
QMean score : 0.348
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