Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNFNVINSKD---------SKSNIGALIENPGIYPFMSGYENLKLLNESKN-----TQDIDKIVSQL-HMDEYIHKKAKTYSLGMKQKLGIAIAFLNEPQFIILDEPMNGLDPKAVRDVRELIVQKSQEGVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
1JI0 Chain:A ((6-226))
--VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKI-IFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASEL----------------------
General information:
TITO was launched using:
RESULT:
Template:
1JI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132101 for 1658 contacts (-79.7/contact) +
2D Compatibility (PS) -22392 + (NN) -11750 + (LL) 1856
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -183387.0 ( -110.61 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1JI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JI0-query.scw
PDB file :
Tito_Scwrl_1JI0.pdb
: