Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDYHPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAWMITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGVLILPYTKMITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIGISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPILMLPILTTAIVSGLVSALVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG
2YDO Chain:A ((55-141))-----------------------------------------------------------------------------------------------------------------------------------------------------VGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVL-----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -52174 for 406 contacts (-128.5/contact) +
2D Compatibility (PS) -7509 + (NN) 4749 + (LL) 23604
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -40080.0 ( -98.72 by residue)
QMean score : -0.111

(partial model without unconserved sides chains):
PDB file : Tito_2YDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDO-query.scw
PDB file : Tito_Scwrl_2YDO.pdb: