Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQI-------ITVSVTTGNKSESDKIVNRISKVFA----HDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
| 1QYS Chain:A ((10-90)) | -------------------------------------------------------------------------------------IDDNGKNFDYTYTVTTESELQKVLNELMDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDGDTVTV----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22825 for 382 contacts (59.8/contact) +
2D Compatibility (PS) -7013 + (NN) 695 + (LL) 13772
1D Compatibility (HY) 2400 + (ID) 450
Total energy: 32229.0 ( 84.37 by residue)
QMean score : 0.139
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