Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKE------WSEFQRVRDEIKLAIEKFKLR
1Z2E Chain:A ((1-134))
MENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEF---
General information:
TITO was launched using:
RESULT:
Template:
1Z2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35958 for 1081 contacts (-33.3/contact) +
2D Compatibility (PS) -14468 + (NN) -11925 + (LL) 340
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -81961.0 ( -75.82 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1Z2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z2E-query.scw
PDB file :
Tito_Scwrl_1Z2E.pdb
: