Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKARARFPLRLMVQEVK
2W9R Chain:A ((25-93))
--------PSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
General information:
TITO was launched using:
RESULT:
Template:
2W9R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33142 for 434 contacts (-76.4/contact) +
2D Compatibility (PS) -7864 + (NN) -8257 + (LL) 760
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -57903.0 ( -133.42 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2W9R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9R-query.scw
PDB file :
Tito_Scwrl_2W9R.pdb
: