Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFEMLYSKIHRATITDANLNYIGS-ITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGKI-CVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG
1PT0 Chain:A ((18-132))
MIRTMLQGKLHRVKVTHADLHYEGSACAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK---
General information:
TITO was launched using:
RESULT:
Template:
1PT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73843 for 826 contacts (-89.4/contact) +
2D Compatibility (PS) -12050 + (NN) -523 + (LL) 344
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -95872.0 ( -116.07 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1PT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PT0-query.scw
PDB file :
Tito_Scwrl_1PT0.pdb
: