Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRISTETELNWEFVESLNENALSDLEERLEIGFSDAFKDFIKRSNYGFSQLRY-FMVGNESYMFKHVLNFNLESLLIDFMQSL--KEWLEPEEIVFANDGYGGYYLWNTT-----TDVVLFLDTDNGSKKVL-LNLNMFLKKLESRG
2PRV Chain:A ((21-139))
--------------TEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFD---H---------ASVVNRTNEYKEHYGLTDGLVVIED-VDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEA
General information:
TITO was launched using:
RESULT:
Template:
2PRV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91173 for 822 contacts (-110.9/contact) +
2D Compatibility (PS) -11908 + (NN) -5658 + (LL) 2132
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -110957.0 ( -134.98 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2PRV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PRV-query.scw
PDB file :
Tito_Scwrl_2PRV.pdb
: