Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNTTQ-KSLLVFMGVFFLIFGVDQAIKHAILEGFHYESLVIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLL---LRQFFFKQKQNKIKGIITLFK
1Q77 Chain:A ((1-138))
---SNAMKVLLVLTDAYS---DCEKAITYAVNFSE-------------KLGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREVWEKLTGST--------EIPGVEYRIGPLSEEVKKFVE---GKGYELVVWACYPSAYLCKVIDGLNLASLIVK
General information:
TITO was launched using:
RESULT:
Template:
1Q77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122892 for 933 contacts (-131.7/contact) +
2D Compatibility (PS) -14380 + (NN) -5549 + (LL) 3248
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -144673.0 ( -155.06 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1Q77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q77-query.scw
PDB file :
Tito_Scwrl_1Q77.pdb
: