Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFEEN--ELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKN---VWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKSNNDR-VDVFFELGCGSVLKGLNKRLSNK-PTISVGDNKGLDEAIEFLEEYV |
| 3HJV Chain:A ((8-309)) | -KFAIVFPGQGSQAVGMLADLAEQYAVVKQTFAEASEVLGYDLW-ALVQDGPVEDLNQTFRTQPALLAASVAIWRVW--QQLGLEQPAVLAGHSLGEYSALVCAGVIDFKQAIKLVELRGQLMQQAVPAGTGAMYAIIGLEDEAIAKACADAAQGEVVSPVNFNSPGQVVIAGQKDAVERAGVLCKEAGAKRALPLPVSVPSHCALMKPAADELAKTLAELEFNAPQIPVINNVDVVAETDPVKIKDALIRQLYSPVRWTECVEQMSAQGVEKLIEMGPGKVLTGLTKRIVKTLEGVAVNDVASLDAVK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181342 for 2644 contacts (-68.6/contact) +
2D Compatibility (PS) -32208 + (NN) -12452 + (LL) 1224
1D Compatibility (HY) -16400 + (ID) 5150
Total energy: -246328.0 ( -93.16 by residue)
QMean score : 0.554
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