Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNEKQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQ---------NLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLSQ---PQILMVQNYGGALDFSWIFVDKKTYRFRSYLGIALEQGVLLVDTIKTGS-FTTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQLGIEMPLVRNVFYTYNNHQERFKPRFNANLSLIVSF |
| 2X27 Chain:X ((6-176)) | --------------------------------------------------------------------KAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFT--YMFA--DKWGVELVAATPFNHQVDVKGLLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27866 for 1098 contacts (-25.4/contact) +
2D Compatibility (PS) -16001 + (NN) 2196 + (LL) 5344
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -42227.0 ( -38.46 by residue)
QMean score : -0.017
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