Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQG-----GAKQKIIELLENVD----ATEID-----VLKIRSKQIREL--IFGTPFPSDLRDEIFQAYEILSQQY------------------------------HMKEA-DVAVRSSATAEDLPDASFAGQ-QDTYLNIKG-------KTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSA---GVMFSIDTETGFKD--AVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQ--LGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGESGEIFIVQARPETVQSQKTKEENQVFEKFKFKNPNE-KKEIILQGRAIGSKIGSGKVRII-NDLEHMNSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSG------------ATDSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVELSNMQET---------QTKIYINIGNPEKAFSFSQLPNHGVGLARMEMIIL---NQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPVIVRTSDFKSNEYMR------------MLGGSSYEP--------NEENPMLGYRGASRYYSESYNEAFSWECEALALVREEMGLTNM------KVMIPFLRTIEE-GKKVL---EILRKNNLESGKN-GLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRD-----------SELVSH----VFDERNEAMLKMFKKAIEACKRHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTAR |
| 1VBG Chain:A ((15-861)) | --------EGNKTMKELLGGKGANLAEM----ASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEHMKESKGLKNDTDLTASDLKE--LVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLR-GTAVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQG--EDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKEM-----------QDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEG--------------------LVEPR-SAIKMVEPGHLDQLLHP-QFENPSAYKDQVIATGLPASPGAAVGQVVFTAEDAEAWHSQGKAAILVRAETSPEDVGGMHAAVGILTERGGMTSHAAVVARGWGKCCVSGCSGIRVNDAEKLVTIGGHVLREGEWLSLNGSTGE---VILG--KQPLSPPALSGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKA----VRQMIMAPTLELRQQALDRLLPYQR-SDF------EGI---FRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCR--LGISYPELT--EMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHGGE-PSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132229 for 5671 contacts (-23.3/contact) +
2D Compatibility (PS) -76859 + (NN) -28236 + (LL) 5688
1D Compatibility (HY) -29200 + (ID) 10900
Total energy: -271736.0 ( -47.92 by residue)
QMean score : 0.309
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