Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGILEQVERVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELDITTKKALLHEAFENKVLKLANQHHIPFDYAKDLIFDNKPLARHQNALILKAFNAKNEVLKEETYYSVGGGFVYTEKELDNLSEEGENESVAYDFSSAKELLELCQKHQKSIAEIVRLRENALKNHPDATMTKIYHAMLECYHNGANSKERYLPGSLKVTRLAPSVKTRLEKHPTSGKDPLALIDYISLYARSIAEENASGGKVVTAPTNGACAVVPSVLSYAKNHLFENLSQKSINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLAHLCQATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC |
1Y6A Chain:A ((313-348)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3582 for 148 contacts (-24.2/contact) +
2D Compatibility (PS) -3673 + (NN) -673 + (LL) 28104
1D Compatibility (HY) -2400 + (ID) 550
Total energy: 17226.0 ( 116.39 by residue)
QMean score : 0.137
|
|
|