Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEFNMVKDFCSRVYELSEFLDKK--LQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
2AEH Chain:A ((294-363)) | -----------------------------------------------------------------------------------------------ADFNQVQTI---QYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQ---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AEH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7974 for 389 contacts (-20.5/contact) +
2D Compatibility (PS) -6989 + (NN) 376 + (LL) 11504
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -6233.0 ( -16.02 by residue)
QMean score : 0.346
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