Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVIERFYPPFLKAFPTLKDLANAPLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFN-------HNQALIDLGALICS-PKPKCAICPFNPYCLGKNHLERHTLKKKQEIIQEERYLGVVIQNNQIALEKIEQKLYLGMHHFPNLKENLEFKLPFLGTIKHSHTKFKLNLNLYLATTKDLKNPIRFYSLKDLETLPISSMTLKILNFLKQKNLFGG |
1MUD Chain:A ((10-210)) | -------VLDWYDKYGRKTLPWQIDK---TPYKVWLSEVMLQQTQVATVIP-YFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILNGNVKRVLARCYAVSGWPGKKEVE---NKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPK---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123624 for 1497 contacts (-82.6/contact) +
2D Compatibility (PS) -20634 + (NN) -13683 + (LL) 9408
1D Compatibility (HY) -22800 + (ID) 4400
Total energy: -175733.0 ( -117.39 by residue)
QMean score : 0.492
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