Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEKRLKAIQNKIASWIKEIESGFIDALFSKIGP--SKMLRSKLMLALLDEKTDAI-LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMGES-IAQALSNAVLRLSRGE-IEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKFKQHGII---EETLKIAQVYSKKALEAIKGENNLILEKLAQDVIYRTF |
1V4H Chain:A ((15-273)) | -----------KVKERIEQILSQFFPEQIMKDLPLYGKMLRVRL--SILSAKNRGVEIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPIT--KEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFA-GMEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQ----MFENRDWSGLMSFMREK----GILKECEETLKVLVKNVIIENSWLRD------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97118 for 1993 contacts (-48.7/contact) +
2D Compatibility (PS) -26948 + (NN) -14617 + (LL) 3800
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -160133.0 ( -80.35 by residue)
QMean score : 0.428
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