Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEKRLKAIQNKIASWIKEIESGFIDALFSKIGP--SKMLRSKLMLALLDEKTDAI-LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMGES-IAQALSNAVLRLSRGE-IEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKFKQHGII---EETLKIAQVYSKKALEAIKGENNLILEKLAQDVIYRTF
1V4H Chain:A ((15-273))-----------KVKERIEQILSQFFPEQIMKDLPLYGKMLRVRL--SILSAKNRGVEIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPIT--KEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFA-GMEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQ----MFENRDWSGLMSFMREK----GILKECEETLKVLVKNVIIENSWLRD------------------


General information:
TITO was launched using:
RESULT:

Template: 1V4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97118 for 1993 contacts (-48.7/contact) +
2D Compatibility (PS) -26948 + (NN) -14617 + (LL) 3800
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -160133.0 ( -80.35 by residue)
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_1V4H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V4H-query.scw
PDB file : Tito_Scwrl_1V4H.pdb: