Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVS----DKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRFWGSN----VIEIGDLTISPDEEKIIYKGREVEVKGKP--FEVLTHLARHRDQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQKMDK-PLGISTVETVRRRGYRFCYPKPACEE
4KFC Chain:A ((6-226))
--VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQ-WSAVPVIVLSARSEESDKIAALDAGADDYLSKPF-GIGELQARLRVALRRHS--APDPLVKFSDVTVDL-AARVIHRGEE-EVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRFML-------
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97964 for 1515 contacts (-64.7/contact) +
2D Compatibility (PS) -22740 + (NN) -11561 + (LL) 660
1D Compatibility (HY) -17200 + (ID) 2750
Total energy: -151555.0 ( -100.04 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: