Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRKLATSVSLISLLISNALYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDNKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLRVPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTNDSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQETELAKYKLKDLENQKKLKALEAELKKKNTKKPRVVEVPIPPKTSDSDETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYYVKSNGLCYANGINLYVKIKNDPYKEGMLCGYE--SVQKLLSPLRDKLKYDKQKLQKALLKDLK |
| 2VAR Chain:A ((75-185)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTSHIKVDNESFTGIYF-----IQRGYPIPMKSELVYYRKGSAGS---RLSPEDINENYVRNSRLVHSTGITLAI---SDNAKEAVIKAFELAKSRSLDTNIRPKLWSSLEKAKETILSILK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13186 for 665 contacts (19.8/contact) +
2D Compatibility (PS) -11228 + (NN) -1198 + (LL) 25404
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: 20214.0 ( 30.40 by residue)
QMean score : ?
|
|
|