Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKMNKVVLHKEYSGFVRFFHWVRALSIFTLIATGFYIAYPFLQPNSSFY-------KGVYLLQAYVRSFHVMFGFLLISALIFRTYLFFTKESLMERRSFSQLLSPKAWIDQMKAYFLISDKPHTKGLYNPIQLVAYFTLVVLIVLMSLSGIVLYYNVYHEGLGAFLANAFKWFEALCGGLANVRFIHHLATWGFILFVPVHVYMVFFHSIRYDSSGADSMINGYGYTKE |
2QJY Chain:A ((51-115)) | -----------------------LAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVN-GGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30055 for 286 contacts (-105.1/contact) +
2D Compatibility (PS) -6034 + (NN) -2494 + (LL) 2308
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -40775.0 ( -142.57 by residue)
QMean score : 0.080
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