Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
3NTN Chain:A ((161-219)) | ------------------------------------------------------------ERQIVHVGAGEISDTSTDAVNGSQLHALATVV--AQNKADIKDLDDEVGLLGEEINKHHHHH------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9892 for 241 contacts (41.0/contact) +
2D Compatibility (PS) -6137 + (NN) -1082 + (LL) 4936
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 4809.0 ( 19.95 by residue)
QMean score : 0.159
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