Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKY---FIFLDENHYFYLIEE--SNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNKQEFLDFKQKYLDFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIENEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQVKNSYLLQIQKNK |
| 2YZM Chain:A ((1-288)) | MRVLLIAGGVSPEHEVSLLSA---EGVLR-HIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDV---------------VFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAV----RKGEPPVVPFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141997 for 2225 contacts (-63.8/contact) +
2D Compatibility (PS) -31177 + (NN) -14675 + (LL) 2248
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -208501.0 ( -93.71 by residue)
QMean score : 0.424
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